Publications

Books

  1. Three world by Karl Popper - translation to persian (download). ترجمه‌ی سخنرانی «سه جهان» از کارل پوپر (بارگیری)

Selected peer-reviewed articles

  1. R. Vahdati, Ali, and Carlos J. Melián. EvoDynamics.Jl: A Framework for Modeling Eco-Evolutionary Dynamics. Journal of Open Source Software 7, no. 79, 2022: 4775. https://doi.org/10.21105/joss.04775.
  2. A. R. Vahdati, J. D. Weissmann, A. Timmermann, M. P. de León, C. P. E. Zollikofer, Exploring Late Pleistocene hominin dispersals, coexistence and extinction with agent-based multi-factor models, Quaternary Science Reviews, 2022, 279, 107391.
  3. G. Datseris, A. R. Vahdati, T. C. DuBois, Agents. jl: a performant and feature-full agent-based modeling software of minimal code complexity, Simulation, 2022, 00375497211068820.
  4. R. Vahdati, A., Agents.jl: agent-based modeling framework in Julia. Journal of Open Source Software, 2019, 4(42), 1611, https://doi.org/10.21105/joss.01611.
  5. R. Vahdati A., Weissmann JD, Timmermann A, Ponce de León MS, Zollikofer CPE. Drivers of Late Pleistocene human survival and dispersal: an agent-based modeling and machine learning approach. Quaternary Science Reviews. 2019 Oct;221:105867, https://doi.org/10.1016/j.quascirev.2019.105867.
  6. Vahdati A. R., Wagner A., Population size affects adaptation in complex ways: simulations on empirical adaptive landscapes. Evolutionary Biology. 2017, https://doi.org/10.1007/s11692-017-9440-9.
  7. Vahdati A. R., Sprouffske K., Wagner A., Effect of population size and mutation rate on the evolution of RNA sequences on an adaptive landscape determined by RNA folding . International Journal Biological Sciences. 2017;13(9):1138–51, https://doi.org/10.7150/ijbs.19436.
  8. Vahdati A. R., Wagner A., 2016 Parallel or convergent evolution in human population genomic data revealed by genotype networks. BMC Evolutionary Biology, 16(1), 154, https://doi.org/10.1186/s12862-016-0722-0.
  9. Dall’Olio G. M., Vahdati A. R., Bertranpetit J., Wagner A., Laayouni H., 2014 VCF2Networks: applying genotype networks to single nucleotide variants data. Bioinformatics: 4–5, https://doi.org/10.1093/bioinformatics/btu650.
  10. Kaerst S.*, Vahdati A. R.*, Brockmann G., Hager R., 2012 Genomic imprinting and genetic effects on muscle traits in mice, BMC Genomics, 13:408, https://doi.org/10.1186/1471-2164-13-408. - * Equal contribution